Difference between revisions of "TSS:Hg 14886.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|SHCA= | |SHCA= | ||
| − | |all_trans= | + | |all_trans=HGNC:10840 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_003029 | |nearest_refseq=NM_003029 | ||
|nearest_unigene=Hs.433795 | |nearest_unigene=Hs.433795 | ||
| − | |num_trans= | + | |num_trans=6464 |
|species=human | |species=human | ||
|start=154971083 | |start=154971083 | ||
|start_of_center_position=154971106 | |start_of_center_position=154971106 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000448116.7 ENST00000368449.8 | + | |transcript_name=ENST00000448116.7 ENST00000368449.8 BC033925 BX647149 AK096169 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_14886.1 | |tss_id=hg_14886.1 | ||
Latest revision as of 11:16, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 154971106 |
|---|---|
| End of the center position in the TSS region: | 154971107 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000448116.7 ENST00000368449.8 BC033925 BX647149 AK096169 |
|---|---|
| Distance: | 337 |
| Num_trans: | 6464 |
| All_trans: | HGNC:10840 |
TATA-Box annotation
| Distance to TSS: | -359 |
|---|---|
| Nearest PromoterID: | NM_001130040 |
| Entrez ID: | 6464 |
| Nearest Unigene: | Hs.433795 |
| Nearest Refseq: | NM_003029 |
| Nearest Ensembl: | ENSG00000160691 |
| Gene Name: | SHC adaptor protein 1 |
| Gene Alias: | SHC|SHCA |
| Gene Description: | SHC adaptor protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
