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Difference between revisions of "TSS:Hg 14890.1"

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{{TSSDetail
 
{{TSSDetail
 
|SHCA=
 
|SHCA=
|all_trans=ENST00000412170.5:0 X68148:0 BC014158:-17 AK130014:-28 ENST00000368453.8:-29 ENST00000368450.5:-29 NM_001202859:-29 NM_003029:-29 NM_001130041:-29 AK315842:-47 ENST00000366442.2:-48 LP764911:-136 LP764913:-136 AK292143:-136
+
|all_trans=HGNC:10840
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.055
 
|cpg_percent=0.055
Line 23: Line 23:
 
|nearest_refseq=NM_003029
 
|nearest_refseq=NM_003029
 
|nearest_unigene=Hs.433795
 
|nearest_unigene=Hs.433795
|num_trans=14
+
|num_trans=6464
 
|species=human
 
|species=human
 
|start=154974316
 
|start=154974316

Latest revision as of 11:17, 20 July 2021

Basic information about the TSS


TSS ID:hg_14890.1
Species:human
Chr:chr1
TSS Classification:yes
Start:154974316
End:154974347
Strand:-
TSS Score:1
Start of the center position in the TSS region:154974331
End of the center position in the TSS region:154974332



Gene and protein annotation


Transcript_name:ENST00000412170.5 X68148
Distance:0
GeneID:6464
HGNC/MGI_ID:HGNC:10840
UniProt_ID:Q5T182
Gene_name:SHC adaptor protein 1
Gene_symbol:SHC1
Gene_synonyms:ShcA p66
Gene_source:HGNC:10840



Transcript annotation


Transcript_name:ENST00000412170.5 X68148
Distance:0
Num_trans:6464
All_trans:HGNC:10840



TATA-Box annotation


Distance to TSS:44
Nearest PromoterID:NM_001130041
Entrez ID:6464
Nearest Unigene:Hs.433795
Nearest Refseq:NM_003029
Nearest Ensembl:ENSG00000160691
Gene Name:SHC adaptor protein 1
Gene Alias:SHC|SHCA
Gene Description:SHC adaptor protein 1
Gene Type:protein-coding
CpG%:0.055
GC%:0.597015
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):