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Difference between revisions of "TSS:Hg 154455.1"

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Line 2: Line 2:
 
|SMAP-8=
 
|SMAP-8=
 
|SMAP8=
 
|SMAP8=
|all_trans=ENST00000562764.5:87 ENST00000258187.9:121 ENST00000564207.5:-137 ENST00000569404.5:160 ENST00000569539.5:166 ENST00000564126.5:169 NM_020465:171 NM_001378342:171 NM_001378338:171 NM_001378345:171 NM_001378346:171 NM_001378339:171 ENST00000562725.5:172 ENST00000565304.5:179 ENST00000567667.5:181 AB021172:201 ENST00000394282.8:480
+
|all_trans=HGNC:14466
 
|chr=chr16
 
|chr=chr16
 
|cpg_percent=0.17
 
|cpg_percent=0.17
Line 24: Line 24:
 
|nearest_refseq=NM_020465
 
|nearest_refseq=NM_020465
 
|nearest_unigene=Hs.322430
 
|nearest_unigene=Hs.322430
|num_trans=17
+
|num_trans=65009
 
|species=human
 
|species=human
 
|start=58463506
 
|start=58463506

Latest revision as of 13:17, 20 July 2021

Basic information about the TSS


TSS ID:hg_154455.1
Species:human
Chr:chr16
TSS Classification:yes
Start:58463506
End:58463544
Strand:+
TSS Score:1
Start of the center position in the TSS region:58463525
End of the center position in the TSS region:58463526



Gene and protein annotation


Transcript_name:ENST00000562764.5
Distance:87
GeneID:65009
HGNC/MGI_ID:HGNC:14466
UniProt_ID:H3BPT6
Gene_name:NDRG family member 4
Gene_symbol:NDRG4
Gene_synonyms:KIAA1180 SMAP-8
Gene_source:HGNC:14466



Transcript annotation


Transcript_name:ENST00000562764.5
Distance:87
Num_trans:65009
All_trans:HGNC:14466



TATA-Box annotation


Distance to TSS:-120
Nearest PromoterID:NM_020465
Entrez ID:65009
Nearest Unigene:Hs.322430
Nearest Refseq:NM_020465
Nearest Ensembl:ENSG00000103034
Gene Name:NDRG family member 4
Gene Alias:BDM1|SMAP-8|SMAP8
Gene Description:NDRG family member 4
Gene Type:protein-coding
CpG%:0.17
GC%:0.810945
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):