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Difference between revisions of "TSS:Hg 158960.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK128415:19 LF209173:27 MA444750:27 AK309386:-44 ENST00000381365.4:-80 NM_001145536:-80 LF326561:174 MA562138:174 ENST00000521575.1:-198 AK308530:-198
+
|all_trans=HGNC:37238
 
|chr=chr17
 
|chr=chr17
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 22: Line 22:
 
|nearest_refseq=NM_001145536
 
|nearest_refseq=NM_001145536
 
|nearest_unigene=Hs.579243
 
|nearest_unigene=Hs.579243
|num_trans=10
+
|num_trans=100130311
 
|species=human
 
|species=human
 
|start=4899615
 
|start=4899615

Latest revision as of 14:57, 20 July 2021

Basic information about the TSS


TSS ID:hg_158960.1
Species:human
Chr:chr17
TSS Classification:yes
Start:4899615
End:4899634
Strand:+
TSS Score:1
Start of the center position in the TSS region:4899624
End of the center position in the TSS region:4899625



Gene and protein annotation


Transcript_name:AK128415
Distance:19
GeneID:100130311
HGNC/MGI_ID:HGNC:37238
UniProt_ID:Q6ZR85
Gene_name:chromosome 17 open reading frame 107
Gene_symbol:C17orf107
Gene_synonyms:
Gene_source:HGNC:37238



Transcript annotation


Transcript_name:AK128415
Distance:19
Num_trans:100130311
All_trans:HGNC:37238



TATA-Box annotation


Distance to TSS:89
Nearest PromoterID:NM_001145536
Entrez ID:100130311
Nearest Unigene:Hs.579243
Nearest Refseq:NM_001145536
Nearest Ensembl:ENSG00000205710
Gene Name:chromosome 17 open reading frame 107
Gene Alias:-
Gene Description:chromosome 17 open reading frame 107
Gene Type:protein-coding
CpG%:0.1
GC%:0.606965
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):