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Difference between revisions of "TSS:Hg 162328.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=L07738:0 AK313852:0 BC113492:0 BC113486:0 BC069493:0 ENST00000226021.5:-9 NM_000727:-9 HQ258641:40 KJ890809:40 KJ896532:40
+
|all_trans=HGNC:1405
 
|chr=chr17
 
|chr=chr17
 
|cpg_percent=0.06
 
|cpg_percent=0.06
Line 22: Line 22:
 
|nearest_refseq=NM_000727
 
|nearest_refseq=NM_000727
 
|nearest_unigene=Hs.147989
 
|nearest_unigene=Hs.147989
|num_trans=10
+
|num_trans=786
 
|species=human
 
|species=human
 
|start=67044562
 
|start=67044562

Latest revision as of 16:10, 20 July 2021

Basic information about the TSS


TSS ID:hg_162328.1
Species:human
Chr:chr17
TSS Classification:yes
Start:67044562
End:67044617
Strand:+
TSS Score:1
Start of the center position in the TSS region:67044589
End of the center position in the TSS region:67044590



Gene and protein annotation


Transcript_name:L07738 AK313852 BC113492 BC113486 BC069493
Distance:0
GeneID:786
HGNC/MGI_ID:HGNC:1405
UniProt_ID:
Gene_name:calcium voltage-gated channel auxiliary subunit gamma 1
Gene_symbol:CACNG1
Gene_synonyms:
Gene_source:HGNC:1405



Transcript annotation


Transcript_name:L07738 AK313852 BC113492 BC113486 BC069493
Distance:0
Num_trans:786
All_trans:HGNC:1405



TATA-Box annotation


Distance to TSS:36
Nearest PromoterID:NM_000727
Entrez ID:786
Nearest Unigene:Hs.147989
Nearest Refseq:NM_000727
Nearest Ensembl:ENSG00000108878
Gene Name:calcium voltage-gated channel auxiliary subunit gamma 1
Gene Alias:CACNLG
Gene Description:calcium voltage-gated channel auxiliary subunit gamma 1
Gene Type:protein-coding
CpG%:0.06
GC%:0.671642
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):