Difference between revisions of "TSS:Hg 163688.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:81 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001092 | |nearest_refseq=NM_001092 | ||
|nearest_unigene=Hs.159306 | |nearest_unigene=Hs.159306 | ||
| − | |num_trans= | + | |num_trans=29 |
|species=human | |species=human | ||
|start=1187263 | |start=1187263 | ||
| Line 28: | Line 28: | ||
|strand=- | |strand=- | ||
|tata_box=-13(GTCCTTAAAGAG,-,0.00),-11(CCTTAAAGAGAC,+,0.00) | |tata_box=-13(GTCCTTAAAGAG,-,0.00),-11(CCTTAAAGAGAC,+,0.00) | ||
| − | |transcript_name= | + | |transcript_name=AK126882 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_163688.1 | |tss_id=hg_163688.1 | ||
Latest revision as of 16:39, 20 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 1187274 |
|---|---|
| End of the center position in the TSS region: | 1187275 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK126882 |
|---|---|
| Distance: | 0 |
| Num_trans: | 29 |
| All_trans: | HGNC:81 |
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NM_001159746 |
| Entrez ID: | 29 |
| Nearest Unigene: | Hs.159306 |
| Nearest Refseq: | NM_001092 |
| Nearest Ensembl: | ENSG00000159842 |
| Gene Name: | ABR activator of RhoGEF and GTPase |
| Gene Alias: | MDB |
| Gene Description: | ABR activator of RhoGEF and GTPase |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -13(GTCCTTAAAGAG,-,0.00),-11(CCTTAAAGAGAC,+,0.00) |
