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Difference between revisions of "TSS:Hg 166012.1"

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Line 5: Line 5:
 
|PC2=
 
|PC2=
 
|PCHC1=
 
|PCHC1=
|all_trans=CU687210:69 ENST00000493253.5:77 BX647923:77 ENST00000577817.3:-85 AB528302:-132 DQ891101:-135 DQ894283:-135 ENST00000540235.5:-162 BC072018:-162 EF608068:164 BC072019:-176 BC011901:-178 X62571:-178 BC000159:-180 BC056421:-180 ENST00000311208.13:-196 ENST00000491673.1:-196 NM_000422:-196 AK304373:-196 AK095342:-198 ENST00000463128.5:-463 LP896073:-463
+
|all_trans=HGNC:6427
 
|chr=chr17
 
|chr=chr17
 
|cpg_percent=0.045
 
|cpg_percent=0.045
Line 27: Line 27:
 
|nearest_refseq=NM_000422
 
|nearest_refseq=NM_000422
 
|nearest_unigene=Hs.2785
 
|nearest_unigene=Hs.2785
|num_trans=22
+
|num_trans=3872
 
|species=human
 
|species=human
 
|start=41624372
 
|start=41624372

Latest revision as of 17:31, 20 July 2021

Basic information about the TSS


TSS ID:hg_166012.1
Species:human
Chr:chr17
TSS Classification:yes
Start:41624372
End:41624379
Strand:-
TSS Score:1
Start of the center position in the TSS region:41624375
End of the center position in the TSS region:41624376



Gene and protein annotation


Transcript_name:CU687210
Distance:69
GeneID:3872
HGNC/MGI_ID:HGNC:6427
UniProt_ID:
Gene_name:keratin 17
Gene_symbol:KRT17
Gene_synonyms:
Gene_source:HGNC:6427



Transcript annotation


Transcript_name:CU687210
Distance:69
Num_trans:3872
All_trans:HGNC:6427



TATA-Box annotation


Distance to TSS:199
Nearest PromoterID:NM_000422
Entrez ID:3872
Nearest Unigene:Hs.2785
Nearest Refseq:NM_000422
Nearest Ensembl:ENSG00000128422
Gene Name:keratin 17
Gene Alias:39.1|CK-17|K17|PC|PC2|PCHC1
Gene Description:keratin 17
Gene Type:protein-coding
CpG%:0.045
GC%:0.691542
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):