Difference between revisions of "TSS:Hg 168982.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:10707 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_003004 | |nearest_refseq=NM_003004 | ||
|nearest_unigene=Hs.558009 | |nearest_unigene=Hs.558009 | ||
| − | |num_trans= | + | |num_trans=6398 |
|species=human | |species=human | ||
|start=82333751 | |start=82333751 | ||
|start_of_center_position=82333763 | |start_of_center_position=82333763 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000269389.8 ENST00000580437.5 ENST00000582563.5 ENST00000583093.5 ENST00000582290.5 | + | |transcript_name=ENST00000269389.8 ENST00000580437.5 ENST00000582563.5 ENST00000583093.5 ENST00000582290.5 U77643 AK223104 AK312980 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_168982.1 | |tss_id=hg_168982.1 | ||
Latest revision as of 18:36, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 82333763 |
|---|---|
| End of the center position in the TSS region: | 82333764 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000269389.8 ENST00000580437.5 ENST00000582563.5 ENST00000583093.5 ENST00000582290.5 U77643 AK223104 AK312980 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6398 |
| All_trans: | HGNC:10707 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_003004 |
| Entrez ID: | 6398 |
| Nearest Unigene: | Hs.558009 |
| Nearest Refseq: | NM_003004 |
| Nearest Ensembl: | ENSG00000141574 |
| Gene Name: | secreted and transmembrane 1 |
| Gene Alias: | K12|SECTM |
| Gene Description: | secreted and transmembrane 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
