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Difference between revisions of "TSS:Hg 184192.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|P542=
 
|P542=
|all_trans=ENST00000448364.5:-26 AK226085:39 ENST00000375114.7:-60 ENST00000413297.5:88 BC103753:191 ENST00000246194.8:197 NM_007367:197 NM_016732:197 AK299766:197 AF148457:212 ENST00000333552.9:239 AK222915:252 L38696:334 BC105018:343 AK291079:361 AK291054:367
+
|all_trans=HGNC:15921
 
|chr=chr20
 
|chr=chr20
 
|cpg_percent=0.07
 
|cpg_percent=0.07
Line 23: Line 23:
 
|nearest_refseq=NM_007367
 
|nearest_refseq=NM_007367
 
|nearest_unigene=Hs.136947
 
|nearest_unigene=Hs.136947
|num_trans=16
+
|num_trans=22913
 
|species=human
 
|species=human
 
|start=33993705
 
|start=33993705

Latest revision as of 00:07, 21 July 2021

Basic information about the TSS


TSS ID:hg_184192.1
Species:human
Chr:chr20
TSS Classification:yes
Start:33993705
End:33993714
Strand:+
TSS Score:1
Start of the center position in the TSS region:33993709
End of the center position in the TSS region:33993710



Gene and protein annotation


Transcript_name:ENST00000448364.5
Distance:-26
GeneID:22913
HGNC/MGI_ID:HGNC:15921
UniProt_ID:Q5QPM1
Gene_name:RALY heterogeneous nuclear ribonucleoprotein
Gene_symbol:RALY
Gene_synonyms:HNRPCL2 P542
Gene_source:HGNC:15921



Transcript annotation


Transcript_name:ENST00000448364.5
Distance:-26
Num_trans:22913
All_trans:HGNC:15921



TATA-Box annotation


Distance to TSS:-201
Nearest PromoterID:NM_016732
Entrez ID:22913
Nearest Unigene:Hs.136947
Nearest Refseq:NM_007367
Nearest Ensembl:ENSG00000125970
Gene Name:RALY heterogeneous nuclear ribonucleoprotein
Gene Alias:HNRPCL2|P542
Gene Description:RALY heterogeneous nuclear ribonucleoprotein
Gene Type:protein-coding
CpG%:0.07
GC%:0.691542
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):