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Difference between revisions of "TSS:Hg 184199.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=L38696:0 BC105018:0 AK291079:11 AK291054:17 AK222915:-82 ENST00000333552.9:-95 AF148457:-122 ENST00000246194.8:-137 NM_007367:-137 NM_016732:-137 AK299766:-137 BC103753:-143 ENST00000413297.5:-246 AK226085:-295 ENST00000448364.5:-368 ENST00000375114.7:-402
+
|all_trans=HGNC:15921
 
|chr=chr20
 
|chr=chr20
 
|cpg_percent=0.135
 
|cpg_percent=0.135
Line 22: Line 22:
 
|nearest_refseq=NM_007367
 
|nearest_refseq=NM_007367
 
|nearest_unigene=Hs.136947
 
|nearest_unigene=Hs.136947
|num_trans=16
+
|num_trans=22913
 
|species=human
 
|species=human
 
|start=33994047
 
|start=33994047

Latest revision as of 00:07, 21 July 2021

Basic information about the TSS


TSS ID:hg_184199.1
Species:human
Chr:chr20
TSS Classification:yes
Start:33994047
End:33994064
Strand:+
TSS Score:1
Start of the center position in the TSS region:33994055
End of the center position in the TSS region:33994056



Gene and protein annotation


Transcript_name:L38696 BC105018
Distance:0
GeneID:22913
HGNC/MGI_ID:HGNC:15921
UniProt_ID:
Gene_name:RALY heterogeneous nuclear ribonucleoprotein
Gene_symbol:RALY
Gene_synonyms:HNRPCL2 P542
Gene_source:HGNC:15921



Transcript annotation


Transcript_name:L38696 BC105018
Distance:0
Num_trans:22913
All_trans:HGNC:15921



TATA-Box annotation


Distance to TSS:145
Nearest PromoterID:NM_007367
Entrez ID:22913
Nearest Unigene:Hs.136947
Nearest Refseq:NM_007367
Nearest Ensembl:ENSG00000125970
Gene Name:RALY heterogeneous nuclear ribonucleoprotein
Gene Alias:HNRPCL2|P542
Gene Description:RALY heterogeneous nuclear ribonucleoprotein
Gene Type:protein-coding
CpG%:0.135
GC%:0.721393
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):