Difference between revisions of "TSS:Hg 188115.1"
From referenceTSS
| Line 3: | Line 3: | ||
|CTCF-T= | |CTCF-T= | ||
|HMGB1L1= | |HMGB1L1= | ||
| − | |all_trans= | + | |all_trans=HGNC:16234 |
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_080618 | |nearest_refseq=NM_080618 | ||
|nearest_unigene=Hs.131543 | |nearest_unigene=Hs.131543 | ||
| − | |num_trans= | + | |num_trans=140690 |
|species=human | |species=human | ||
|start=57525123 | |start=57525123 | ||
|start_of_center_position=57525137 | |start_of_center_position=57525137 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC060763 AK313990 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_188115.1 | |tss_id=hg_188115.1 | ||
Latest revision as of 01:32, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 57525137 |
|---|---|
| End of the center position in the TSS region: | 57525138 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC060763 AK313990 |
|---|---|
| Distance: | 0 |
| Num_trans: | 140690 |
| All_trans: | HGNC:16234 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001269055 |
| Entrez ID: | 140690 |
| Nearest Unigene: | Hs.131543 |
| Nearest Refseq: | NM_080618 |
| Nearest Ensembl: | ENSG00000124092 |
| Gene Name: | CCCTC-binding factor like |
| Gene Alias: | BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2 |
| Gene Description: | CCCTC-binding factor like |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
