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Difference between revisions of "TSS:Hg 2034.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|DYT2=
 
|DYT2=
|all_trans=BT019750:-329 BT019789:-329 EU832747:-331 EU832668:-331 D16593:-332
+
|all_trans=HGNC:5144
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.06
 
|cpg_percent=0.06
Line 23: Line 23:
 
|nearest_refseq=NM_002143
 
|nearest_refseq=NM_002143
 
|nearest_unigene=Hs.632391
 
|nearest_unigene=Hs.632391
|num_trans=5
+
|num_trans=3208
 
|species=human
 
|species=human
 
|start=32889227
 
|start=32889227

Latest revision as of 06:22, 21 July 2021

Basic information about the TSS


TSS ID:hg_2034.1
Species:human
Chr:chr1
TSS Classification:no
Start:32889227
End:32889236
Strand:+
TSS Score:1
Start of the center position in the TSS region:32889231
End of the center position in the TSS region:32889232



Gene and protein annotation


Transcript_name:BT019750 BT019789
Distance:-329
GeneID:3208
HGNC/MGI_ID:HGNC:5144
UniProt_ID:
Gene_name:hippocalcin
Gene_symbol:HPCA
Gene_synonyms:
Gene_source:HGNC:5144



Transcript annotation


Transcript_name:BT019750 BT019789
Distance:-329
Num_trans:3208
All_trans:HGNC:5144



TATA-Box annotation


Distance to TSS:2741
Nearest PromoterID:NM_002143
Entrez ID:3208
Nearest Unigene:Hs.632391
Nearest Refseq:NM_002143
Nearest Ensembl:ENSG00000121905
Gene Name:hippocalcin
Gene Alias:BDR2|DYT2
Gene Description:hippocalcin
Gene Type:protein-coding
CpG%:0.06
GC%:0.636816
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):