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Difference between revisions of "TSS:Hg 220130.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=AF131775:36
+
|all_trans=HGNC:28773
 
|bA163M19.1=
 
|bA163M19.1=
 
|chr=chr10
 
|chr=chr10
Line 23: Line 23:
 
|nearest_refseq=NM_019054
 
|nearest_refseq=NM_019054
 
|nearest_unigene=Hs.500419
 
|nearest_unigene=Hs.500419
|num_trans=1
+
|num_trans=54537
 
|species=human
 
|species=human
 
|start=87158080
 
|start=87158080

Latest revision as of 07:25, 21 July 2021

Basic information about the TSS


TSS ID:hg_220130.1
Species:human
Chr:chr10
TSS Classification:no
Start:87158080
End:87158081
Strand:+
TSS Score:1
Start of the center position in the TSS region:87158080
End of the center position in the TSS region:87158081



Gene and protein annotation


Transcript_name:AF131775
Distance:36
GeneID:54537
HGNC/MGI_ID:HGNC:28773
UniProt_ID:
Gene_name:shieldin complex subunit 2
Gene_symbol:SHLD2
Gene_synonyms:FAM35A1 MGC5560 RINN2 bA163M19.1
Gene_source:HGNC:28773



Transcript annotation


Transcript_name:AF131775
Distance:36
Num_trans:54537
All_trans:HGNC:28773



TATA-Box annotation


Distance to TSS:62875
Nearest PromoterID:NM_019054
Entrez ID:54537
Nearest Unigene:Hs.500419
Nearest Refseq:NM_019054
Nearest Ensembl:ENSG00000122376
Gene Name:shieldin complex subunit 2
Gene Alias:FAM35A|FAM35A1|RINN2|bA163M19.1
Gene Description:shieldin complex subunit 2
Gene Type:protein-coding
CpG%:0.01
GC%:0.353234
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):