Difference between revisions of "TSS:Hg 232130.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:3271 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_173791 | |nearest_refseq=NM_173791 | ||
|nearest_unigene=Hs.501149 | |nearest_unigene=Hs.501149 | ||
| − | |num_trans= | + | |num_trans=8661 |
|species=human | |species=human | ||
|start=119080864 | |start=119080864 | ||
|start_of_center_position=119080873 | |start_of_center_position=119080873 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=JX312508 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232130.1 | |tss_id=hg_232130.1 | ||
Latest revision as of 11:04, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 119080873 |
|---|---|
| End of the center position in the TSS region: | 119080874 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | JX312508 |
|---|---|
| Distance: | 42 |
| Num_trans: | 8661 |
| All_trans: | HGNC:3271 |
TATA-Box annotation
| Distance to TSS: | 35 |
|---|---|
| Nearest PromoterID: | NM_173791 |
| Entrez ID: | 118987 |
| Nearest Unigene: | Hs.501149 |
| Nearest Refseq: | NM_173791 |
| Nearest Ensembl: | ENSG00000165650 |
| Gene Name: | eukaryotic translation initiation factor 3 subunit A |
| Gene Alias: | PDZK8 |
| Gene Description: | PDZ domain containing 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
