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Difference between revisions of "TSS:Hg 232268.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|Hsd17b_2=
 
|Hsd17b_2=
|all_trans=AK294827:69 ENST00000479913.1:-115 NM_001355216:-115
+
|all_trans=HGNC:9967
 
|bA291L22.1=
 
|bA291L22.1=
 
|chr=chr10
 
|chr=chr10
Line 24: Line 24:
 
|nearest_refseq=NM_182829
 
|nearest_refseq=NM_182829
 
|nearest_unigene=Hs.652484
 
|nearest_unigene=Hs.652484
|num_trans=3
+
|num_trans=5979
 
|species=human
 
|species=human
 
|start=43104846
 
|start=43104846

Latest revision as of 11:07, 21 July 2021

Basic information about the TSS


TSS ID:hg_232268.1
Species:human
Chr:chr10
TSS Classification:yes
Start:43104846
End:43104847
Strand:+
TSS Score:1
Start of the center position in the TSS region:43104846
End of the center position in the TSS region:43104847



Gene and protein annotation


Transcript_name:AK294827
Distance:69
GeneID:5979
HGNC/MGI_ID:HGNC:9967
UniProt_ID:
Gene_name:ret proto-oncogene
Gene_symbol:RET
Gene_synonyms:CDHF12 CDHR16 PTC RET51
Gene_source:HGNC:9967



Transcript annotation


Transcript_name:AK294827
Distance:69
Num_trans:5979
All_trans:HGNC:9967



TATA-Box annotation


Distance to TSS:49
Nearest PromoterID:NR_003086
Entrez ID:158160
Nearest Unigene:Hs.652484
Nearest Refseq:NM_182829
Nearest Ensembl:ENSG00000099251
Gene Name:ret proto-oncogene
Gene Alias:HSD17B7|Hsd17b_2|bA291L22.1
Gene Description:hydroxysteroid 17-beta dehydrogenase 7 pseudogene 2
Gene Type:pseudo
CpG%:0.095
GC%:0.606965
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):