Personal tools

Difference between revisions of "TSS:Hg 232333.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|MRT37=
 
|MRT37=
|all_trans=BC017404:166
+
|all_trans=HGNC:17362
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 23: Line 23:
 
|nearest_refseq=NM_001149
 
|nearest_refseq=NM_001149
 
|nearest_unigene=Hs.499725
 
|nearest_unigene=Hs.499725
|num_trans=1
+
|num_trans=84159
 
|species=human
 
|species=human
 
|start=62095077
 
|start=62095077

Latest revision as of 11:08, 21 July 2021

Basic information about the TSS


TSS ID:hg_232333.1
Species:human
Chr:chr10
TSS Classification:no
Start:62095077
End:62095082
Strand:+
TSS Score:1
Start of the center position in the TSS region:62095079
End of the center position in the TSS region:62095080



Gene and protein annotation


Transcript_name:BC017404
Distance:166
GeneID:84159
HGNC/MGI_ID:HGNC:17362
UniProt_ID:
Gene_name:AT-rich interaction domain 5B
Gene_symbol:ARID5B
Gene_synonyms:FLJ21150 MRF2
Gene_source:HGNC:17362



Transcript annotation


Transcript_name:BC017404
Distance:166
Num_trans:84159
All_trans:HGNC:17362



TATA-Box annotation


Distance to TSS:58310
Nearest PromoterID:NM_001149
Entrez ID:288
Nearest Unigene:Hs.499725
Nearest Refseq:NM_001149
Nearest Ensembl:ENSG00000151150
Gene Name:AT-rich interaction domain 5B
Gene Alias:ANKYRIN-G|MRT37
Gene Description:ankyrin 3
Gene Type:protein-coding
CpG%:0.01
GC%:0.383085
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):80(GCACATAAAAAG,-,0.00)