Difference between revisions of "TSS:Hg 233231.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TRIM5alpha= | |TRIM5alpha= | ||
| − | |all_trans= | + | |all_trans=HGNC:15228 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_033034 | |nearest_refseq=NM_033034 | ||
|nearest_unigene=Hs.125300 | |nearest_unigene=Hs.125300 | ||
| − | |num_trans= | + | |num_trans=390077 |
|species=human | |species=human | ||
|start=5820242 | |start=5820242 | ||
Latest revision as of 11:27, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5820242 |
|---|---|
| End of the center position in the TSS region: | 5820243 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000317037.2 BC140732 |
|---|---|
| Distance: | 71 |
| Num_trans: | 390077 |
| All_trans: | HGNC:15228 |
TATA-Box annotation
| Distance to TSS: | 4981 |
|---|---|
| Nearest PromoterID: | NM_033093 |
| Entrez ID: | 85363 |
| Nearest Unigene: | Hs.125300 |
| Nearest Refseq: | NM_033034 |
| Nearest Ensembl: | ENSG00000132256 |
| Gene Name: | olfactory receptor family 52 subfamily N member 2 |
| Gene Alias: | RNF88|TRIM5alpha |
| Gene Description: | tripartite motif containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
