Difference between revisions of "TSS:Hg 233562.1"
From referenceTSS
| Line 3: | Line 3: | ||
|PP1alpha= | |PP1alpha= | ||
|PPP1A= | |PPP1A= | ||
| − | |all_trans= | + | |all_trans=HGNC:25565 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_002708 | |nearest_refseq=NM_002708 | ||
|nearest_unigene=Hs.183994 | |nearest_unigene=Hs.183994 | ||
| − | |num_trans= | + | |num_trans=55732 |
|species=human | |species=human | ||
|start=169795273 | |start=169795273 | ||
Latest revision as of 11:34, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 169795273 |
|---|---|
| End of the center position in the TSS region: | 169795274 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000286031.10 AL354614 |
|---|---|
| Distance: | 135 |
| Num_trans: | 55732 |
| All_trans: | HGNC:25565 |
TATA-Box annotation
| Distance to TSS: | 3132 |
|---|---|
| Nearest PromoterID: | NM_002708 |
| Entrez ID: | 5499 |
| Nearest Unigene: | Hs.183994 |
| Nearest Refseq: | NM_002708 |
| Nearest Ensembl: | ENSG00000172531 |
| Gene Name: | chromosome 1 open reading frame 112 |
| Gene Alias: | PP-1A|PP1A|PP1alpha|PPP1A |
| Gene Description: | protein phosphatase 1 catalytic subunit alpha |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -84(GGATCTAAAAGA,-,0.00) |
