Difference between revisions of "TSS:Hg 233568.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:31932 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_033791 | |nearest_refseq=NR_033791 | ||
|nearest_unigene=Hs.523838 | |nearest_unigene=Hs.523838 | ||
| − | |num_trans= | + | |num_trans=149281 |
|species=human | |species=human | ||
|start=170145958 | |start=170145958 | ||
| Line 28: | Line 28: | ||
|strand=+ | |strand=+ | ||
|tata_box=49(GCTCTTAAGGCG,+,0.00) | |tata_box=49(GCTCTTAAGGCG,+,0.00) | ||
| − | |transcript_name=ENST00000439373.3 | + | |transcript_name=ENST00000439373.3 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_233568.1 | |tss_id=hg_233568.1 | ||
Latest revision as of 11:35, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 170145958 |
|---|---|
| End of the center position in the TSS region: | 170145959 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000439373.3 |
|---|---|
| Distance: | 0 |
| Num_trans: | 149281 |
| All_trans: | HGNC:31932 |
TATA-Box annotation
| Distance to TSS: | -4601 |
|---|---|
| Nearest PromoterID: | NR_033791 |
| Entrez ID: | 390213 |
| Nearest Unigene: | Hs.523838 |
| Nearest Refseq: | NR_033791 |
| Nearest Ensembl: | |
| Gene Name: | methyltransferase like 11B |
| Gene Alias: | - |
| Gene Description: | double C2 domain gamma, pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0.065 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 49(GCTCTTAAGGCG,+,0.00) |
