Difference between revisions of "TSS:Hg 233740.1"
From referenceTSS
| Line 33: | Line 33: | ||
|strand=+ | |strand=+ | ||
|tata_box=-84(GTCCCTAAAAGA,-,0.00),71(CTTTTAATAGGC,+,0.00) | |tata_box=-84(GTCCCTAAAAGA,-,0.00),71(CTTTTAATAGGC,+,0.00) | ||
| − | |transcript_name=NR_135115 NR_135114 | + | |transcript_name=NR_135115.1 NR_135114.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_233740.1 | |tss_id=hg_233740.1 | ||
Latest revision as of 11:38, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 19210241 |
|---|---|
| End of the center position in the TSS region: | 19210242 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_135115.1 NR_135114.1 |
|---|---|
| Distance: | 135 |
| Num_trans: | 6 |
| All_trans: | NR_135115:135 NR_135114:135 AK096098:144 ENST00000437898.1:250 LF357177:287 MA592754:287 |
TATA-Box annotation
| Distance to TSS: | -7038 |
|---|---|
| Nearest PromoterID: | NM_001162952 |
| Entrez ID: | 54843 |
| Nearest Unigene: | Hs.369520 |
| Nearest Refseq: | NM_032379 |
| Nearest Ensembl: | ENSG00000137501 |
| Gene Name: | EMC1 antisense RNA 1 |
| Gene Alias: | CHR11SYT|EXO4|PPP1R151|SGA72M|SLP2|SLP2A |
| Gene Description: | synaptotagmin like 2 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.353234 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -84(GTCCCTAAAAGA,-,0.00),71(CTTTTAATAGGC,+,0.00) |
