Difference between revisions of "TSS:Hg 233751.1"
From referenceTSS
| Line 5: | Line 5: | ||
|PGHS-2= | |PGHS-2= | ||
|PHS-2= | |PHS-2= | ||
| − | |all_trans= | + | |all_trans=HGNC:1491 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| Line 28: | Line 28: | ||
|nearest_refseq=NM_000963 | |nearest_refseq=NM_000963 | ||
|nearest_unigene=Hs.196384 | |nearest_unigene=Hs.196384 | ||
| − | |num_trans= | + | |num_trans=832 |
|species=human | |species=human | ||
|start=19485554 | |start=19485554 | ||
| Line 34: | Line 34: | ||
|strand=- | |strand=- | ||
|tata_box=50(CTTTTTATAAGA,+,0.00) | |tata_box=50(CTTTTTATAAGA,+,0.00) | ||
| − | |transcript_name=ENST00000264202.8 ENST00000459967.6 | + | |transcript_name=ENST00000264202.8 ENST00000459967.6 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_233751.1 | |tss_id=hg_233751.1 | ||
Latest revision as of 11:39, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 19485556 |
|---|---|
| End of the center position in the TSS region: | 19485557 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000264202.8 ENST00000459967.6 |
|---|---|
| Distance: | 16 |
| Num_trans: | 832 |
| All_trans: | HGNC:1491 |
TATA-Box annotation
| Distance to TSS: | 26 |
|---|---|
| Nearest PromoterID: | NM_000963 |
| Entrez ID: | 5743 |
| Nearest Unigene: | Hs.196384 |
| Nearest Refseq: | NM_000963 |
| Nearest Ensembl: | ENSG00000073756 |
| Gene Name: | capping actin protein of muscle Z-line subunit beta |
| Gene Alias: | COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 |
| Gene Description: | prostaglandin-endoperoxide synthase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 50(CTTTTTATAAGA,+,0.00) |
