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Difference between revisions of "TSS:Hg 234424.1"

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Line 4: Line 4:
 
|K4=
 
|K4=
 
|WSN1=
 
|WSN1=
|all_trans=ENST00000679319.1:0 ENST00000677224.1:0 ENST00000677279.1:0 ENST00000678513.1:0 ENST00000676707.1:0 ENST00000679063.1:0 ENST00000678279.1:0 ENST00000677539.1:0 ENST00000677191.1:0 ENST00000678456.1:0 ENST00000676572.1:0 ENST00000679344.1:0 ENST00000678212.1:0 ENST00000677778.1:0 ENST00000678347.1:-224 ENST00000678876.1:-224 ENST00000677945.1:-224 ENST00000678934.1:-224 ENST00000678597.1:-224 ENST00000678873.1:-224 ENST00000677488.1:265 ENST00000678947.1:265 ENST00000676472.1:265 ENST00000678611.1:265 ENST00000676951.1:265 ENST00000676853.1:265 ENST00000678424.1:265 ENST00000678581.1:265 ENST00000678970.1:265 ENST00000676886.1:265 ENST00000678412.1:265 ENST00000679079.1:265 BC035253:-369 ENST00000677291.1:-403 ENST00000677645.1:-403 ENST00000677636.1:-403
+
|all_trans=HGNC:5031
 
|chr=chr12
 
|chr=chr12
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 26: Line 26:
 
|nearest_refseq=NM_002272
 
|nearest_refseq=NM_002272
 
|nearest_unigene=Hs.654610
 
|nearest_unigene=Hs.654610
|num_trans=36
+
|num_trans=3178
 
|species=human
 
|species=human
 
|start=54282796
 
|start=54282796

Latest revision as of 11:53, 21 July 2021

Basic information about the TSS


TSS ID:hg_234424.1
Species:human
Chr:chr12
TSS Classification:no
Start:54282796
End:54282814
Strand:+
TSS Score:1
Start of the center position in the TSS region:54282805
End of the center position in the TSS region:54282806



Gene and protein annotation


Transcript_name:ENST00000679319.1 ENST00000677224.1 ENST00000677279.1 ENST00000678513.1 ENST00000676707.1 ENST00000679063.1 ENST00000678279.1 ENST00000677539.1 ENST00000677191.1 ENST00000678456.1 ENST00000676572.1 ENST00000679344.1 ENST00000678212.1 ENST00000677778.1
Distance:0
GeneID:3178
HGNC/MGI_ID:HGNC:5031
UniProt_ID:
Gene_name:heterogeneous nuclear ribonucleoprotein A1
Gene_symbol:HNRNPA1
Gene_synonyms:ALS20 hnRNP-A1
Gene_source:HGNC:5031



Transcript annotation


Transcript_name:ENST00000679319.1 ENST00000677224.1 ENST00000677279.1 ENST00000678513.1 ENST00000676707.1 ENST00000679063.1 ENST00000678279.1 ENST00000677539.1 ENST00000677191.1 ENST00000678456.1 ENST00000676572.1 ENST00000679344.1 ENST00000678212.1 ENST00000677778.1
Distance:0
Num_trans:3178
All_trans:HGNC:5031



TATA-Box annotation


Distance to TSS:7022
Nearest PromoterID:NM_002272
Entrez ID:3851
Nearest Unigene:Hs.654610
Nearest Refseq:NM_002272
Nearest Ensembl:ENSG00000170477
Gene Name:heterogeneous nuclear ribonucleoprotein A1
Gene Alias:CK-4|CK4|CYK4|K4|WSN1
Gene Description:keratin 4
Gene Type:protein-coding
CpG%:0.02
GC%:0.572139
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):