Personal tools

Difference between revisions of "TSS:Hg 23468.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=AK125495:-176 BX647844:-184 CR627255:295 BC016370:-359 BX647448:-360 AK092683:399
+
|all_trans=HGNC:14303
 
|chr=chr2
 
|chr=chr2
 
|cpg_percent=0.005
 
|cpg_percent=0.005
Line 22: Line 22:
 
|nearest_refseq=NM_152381
 
|nearest_refseq=NM_152381
 
|nearest_unigene=Hs.73680
 
|nearest_unigene=Hs.73680
|num_trans=6
+
|num_trans=129446
 
|species=human
 
|species=human
 
|start=167248113
 
|start=167248113

Latest revision as of 11:59, 21 July 2021

Basic information about the TSS


TSS ID:hg_23468.1
Species:human
Chr:chr2
TSS Classification:no
Start:167248113
End:167248124
Strand:+
TSS Score:1
Start of the center position in the TSS region:167248118
End of the center position in the TSS region:167248119



Gene and protein annotation


Transcript_name:AK125495
Distance:-176
GeneID:129446
HGNC/MGI_ID:HGNC:14303
UniProt_ID:
Gene_name:xin actin binding repeat containing 2
Gene_symbol:XIRP2
Gene_synonyms:
Gene_source:HGNC:14303



Transcript annotation


Transcript_name:AK125495
Distance:-176
Num_trans:129446
All_trans:HGNC:14303



TATA-Box annotation


Distance to TSS:60747
Nearest PromoterID:NM_001199145
Entrez ID:129446
Nearest Unigene:Hs.73680
Nearest Refseq:NM_152381
Nearest Ensembl:ENSG00000163092
Gene Name:xin actin binding repeat containing 2
Gene Alias:CMYA3
Gene Description:xin actin binding repeat containing 2
Gene Type:protein-coding
CpG%:0.005
GC%:0.38806
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):12(CACTTGAAAAGC,-,0.00)