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Difference between revisions of "TSS:Hg 235019.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000327359.7:-2 AK295579:-2 NM_001242786:-89 NM_001242787:-89 LF385530:-89 MA621107:-89 AK294899:-89 ENST00000440513.7:-101 ENST00000550692.1:-101
+
|all_trans=HGNC:1107 HGNC:11551
 
|chr=chr14
 
|chr=chr14
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 22: Line 22:
 
|nearest_refseq=NR_046663
 
|nearest_refseq=NR_046663
 
|nearest_unigene=Hs.578066
 
|nearest_unigene=Hs.578066
|num_trans=9
+
|num_trans=2972
 
|species=human
 
|species=human
 
|start=105315487
 
|start=105315487

Latest revision as of 12:06, 21 July 2021

Basic information about the TSS


TSS ID:hg_235019.1
Species:human
Chr:chr14
TSS Classification:yes
Start:105315487
End:105315488
Strand:-
TSS Score:1
Start of the center position in the TSS region:105315487
End of the center position in the TSS region:105315488



Gene and protein annotation


Transcript_name:ENST00000327359.7 AK295579
Distance:-2
GeneID:2972
HGNC/MGI_ID:HGNC:1107 HGNC:11551
UniProt_ID:Q92994
Gene_name:BRF1 RNA polymerase III transcription initiation factor subunit; ZFP36 ring finger protein like 1
Gene_symbol:BRF1 ZFP36L1
Gene_synonyms:BRF Berg36 ERF1 RNF162B TFIIIB90 TIS11B cMG1 hBRF
Gene_source:HGNC:1107 HGNC:11551



Transcript annotation


Transcript_name:ENST00000327359.7 AK295579
Distance:-2
Num_trans:2972
All_trans:HGNC:1107 HGNC:11551



TATA-Box annotation


Distance to TSS:35901
Nearest PromoterID:NR_046663
Entrez ID:100874096
Nearest Unigene:Hs.578066
Nearest Refseq:NR_046663
Nearest Ensembl:ENSG00000229918
Gene Name:BRF1 RNA polymerase III transcription initiation factor subunit; ZFP36 ring finger protein like 1
Gene Alias:-
Gene Description:DOCK9 antisense RNA 1
Gene Type:ncRNA
CpG%:0.01
GC%:0.427861
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):