Difference between revisions of "TSS:Hg 236500.1"
From referenceTSS
| Line 3: | Line 3: | ||
|RHOIP3= | |RHOIP3= | ||
|RIP3= | |RIP3= | ||
| − | |all_trans= | + | |all_trans=HGNC:11050 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.2 | |cpg_percent=0.2 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_015134 | |nearest_refseq=NM_015134 | ||
|nearest_unigene=Hs.462341 | |nearest_unigene=Hs.462341 | ||
| − | |num_trans= | + | |num_trans=6532 |
|p116Rip= | |p116Rip= | ||
|species=human | |species=human | ||
Latest revision as of 12:39, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 30235817 |
|---|---|
| End of the center position in the TSS region: | 30235818 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000394821.2 AK308014 |
|---|---|
| Distance: | 120 |
| Num_trans: | 6532 |
| All_trans: | HGNC:11050 |
TATA-Box annotation
| Distance to TSS: | -10 |
|---|---|
| Nearest PromoterID: | NM_015134 |
| Entrez ID: | 23164 |
| Nearest Unigene: | Hs.462341 |
| Nearest Refseq: | NM_015134 |
| Nearest Ensembl: | ENSG00000133030 |
| Gene Name: | solute carrier family 6 member 4 |
| Gene Alias: | M-RIP|MRIP|RHOIP3|RIP3|p116Rip |
| Gene Description: | myosin phosphatase Rho interacting protein |
| Gene Type: | protein-coding |
| CpG%: | 0.2 |
| GC%: | 0.850746 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
