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Difference between revisions of "TSS:Hg 237075.1"

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Line 5: Line 5:
 
|DFNA26=
 
|DFNA26=
 
|HEL-176=
 
|HEL-176=
|all_trans=NM_001353233:149 NM_001198548:149 NM_001198546:149 NM_001353232:149 NM_001353237:149 AB017800:149 ENST00000589544.5:229 BC000313:470 ENST00000590712.5:495 AK297185:495
+
|all_trans=HGNC:7870
 
|chr=chr18
 
|chr=chr18
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 27: Line 27:
 
|nearest_refseq=NM_001614
 
|nearest_refseq=NM_001614
 
|nearest_unigene=Hs.514581
 
|nearest_unigene=Hs.514581
|num_trans=10
+
|num_trans=8715
 
|species=human
 
|species=human
 
|start=34223699
 
|start=34223699
 
|start_of_center_position=34223699
 
|start_of_center_position=34223699
 
|strand=-
 
|strand=-
|transcript_name=NM_001353233 NM_001198548 NM_001198546 NM_001353232 NM_001353237 AB017800
+
|transcript_name=AB017800
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_237075.1
 
|tss_id=hg_237075.1

Latest revision as of 12:51, 21 July 2021

Basic information about the TSS


TSS ID:hg_237075.1
Species:human
Chr:chr18
TSS Classification:yes
Start:34223699
End:34223700
Strand:-
TSS Score:1
Start of the center position in the TSS region:34223699
End of the center position in the TSS region:34223700



Gene and protein annotation


Transcript_name:AB017800
Distance:149
GeneID:8715
HGNC/MGI_ID:HGNC:7870
UniProt_ID:O94818
Gene_name:nucleolar protein 4
Gene_symbol:NOL4
Gene_synonyms:CT125 HRIHFB2255 NOLP
Gene_source:HGNC:7870



Transcript annotation


Transcript_name:AB017800
Distance:149
Num_trans:8715
All_trans:HGNC:7870



TATA-Box annotation


Distance to TSS:2772
Nearest PromoterID:NM_001199954
Entrez ID:71
Nearest Unigene:Hs.514581
Nearest Refseq:NM_001614
Nearest Ensembl:ENSG00000184009
Gene Name:nucleolar protein 4
Gene Alias:ACT|ACTG|DFNA20|DFNA26|HEL-176
Gene Description:actin gamma 1
Gene Type:protein-coding
CpG%:0.02
GC%:0.383085
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):