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Difference between revisions of "TSS:Hg 238112.1"

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Line 2: Line 2:
 
|HH0048=
 
|HH0048=
 
|KLP-11=
 
|KLP-11=
|all_trans=ENST00000371196.6:13 AY071919:13 DQ294738:15 ENST00000609232.5:-60 ENST00000429804.7:-60 ENST00000422869.6:-60 ENST00000608425.5:-60 ENST00000481655.2:-60 NM_001269040:-60 NM_001269042:-60 NM_001269046:-60 NM_080618:-60 NM_001269047:-60 NM_001269045:-60 NM_001269051:-60 DQ778108:-60 DQ778109:-60 DQ778112:-60 DQ778122:-60 DQ778123:-60 DQ778113:-60 ENST00000243914.7:383 AK128070:383 NM_001269050:452 NM_001269055:452 AK313990:452 BC060763:463 NM_001269043:465 NM_001269054:465 NM_001269049:465 ENST00000423479.7:485 ENST00000502686.6:485 ENST00000433949.7:485 ENST00000539382.5:485 ENST00000608903.5:485 ENST00000608858.5:485 ENST00000608108.1:485 DQ778111:494 AF336042:494 DQ778124:494 DQ778125:494 DQ778126:494 DQ778127:494 DQ778128:494 DQ778129:494
+
|all_trans=HGNC:16234
 
|chr=chr20
 
|chr=chr20
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 24: Line 24:
 
|nearest_refseq=NM_004798
 
|nearest_refseq=NM_004798
 
|nearest_unigene=Hs.369670
 
|nearest_unigene=Hs.369670
|num_trans=45
+
|num_trans=140690
 
|species=human
 
|species=human
 
|start=57525591
 
|start=57525591

Latest revision as of 13:14, 21 July 2021

Basic information about the TSS


TSS ID:hg_238112.1
Species:human
Chr:chr20
TSS Classification:yes
Start:57525591
End:57525592
Strand:-
TSS Score:1
Start of the center position in the TSS region:57525591
End of the center position in the TSS region:57525592



Gene and protein annotation


Transcript_name:ENST00000371196.6 AY071919
Distance:13
GeneID:140690
HGNC/MGI_ID:HGNC:16234
UniProt_ID:Q8NI51
Gene_name:CCCTC-binding factor like
Gene_symbol:CTCFL
Gene_synonyms:BORIS CT27 dJ579F20.2
Gene_source:HGNC:16234



Transcript annotation


Transcript_name:ENST00000371196.6 AY071919
Distance:13
Num_trans:140690
All_trans:HGNC:16234



TATA-Box annotation


Distance to TSS:32048
Nearest PromoterID:NM_004798
Entrez ID:9371
Nearest Unigene:Hs.369670
Nearest Refseq:NM_004798
Nearest Ensembl:ENSG00000101350
Gene Name:CCCTC-binding factor like
Gene Alias:FLA8|HH0048|KLP-11
Gene Description:kinesin family member 3B
Gene Type:protein-coding
CpG%:0.01
GC%:0.412935
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):