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Difference between revisions of "TSS:Hg 238265.1"

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{{TSSDetail
 
{{TSSDetail
 
|TMEPAI=
 
|TMEPAI=
|all_trans=ENST00000357903.7:9 LF385141:-22 MA620718:-22 ENST00000346798.8:26 NM_001136129:26 NM_000484:26 NM_201414:26 NM_201413:26 NM_001204302:26 NM_001204301:26 NM_001204303:26 NM_001136130:26 NM_001385253:26 M35675:26 ENST00000348990.9:29 Y00264:29 AK297412:29 AK294534:29 AK298861:29 LF214042:30 MA449619:30 BC065529:45 BC065523:45 ENST00000354192.7:49 AF282245:49 ENST00000474136.5:50 BC004369:50 X06989:58 MA353526:90 AK297229:112 AK312326:112 ENST00000358918.7:129 ENST00000439274.6:142 HM005315:156 AB384791:171 EU832797:176 GQ129348:176 KJ901289:176 LF210650:-262 MA446227:-262 LF213391:321 MA448968:321 ENST00000359726.7:-330 NM_001136131:-330 LF385472:-330 MA621049:-330 AK296229:-330
+
|all_trans=HGNC:620
 
|chr=chr21
 
|chr=chr21
 
|cpg_percent=0.135
 
|cpg_percent=0.135
Line 23: Line 23:
 
|nearest_refseq=NM_020182
 
|nearest_refseq=NM_020182
 
|nearest_unigene=Hs.517155
 
|nearest_unigene=Hs.517155
|num_trans=47
+
|num_trans=351
 
|species=human
 
|species=human
 
|start=26170795
 
|start=26170795

Latest revision as of 13:18, 21 July 2021

Basic information about the TSS


TSS ID:hg_238265.1
Species:human
Chr:chr21
TSS Classification:yes
Start:26170795
End:26170798
Strand:-
TSS Score:1
Start of the center position in the TSS region:26170796
End of the center position in the TSS region:26170797



Gene and protein annotation


Transcript_name:ENST00000357903.7
Distance:9
GeneID:351
HGNC/MGI_ID:HGNC:620
UniProt_ID:P05067
Gene_name:amyloid beta precursor protein
Gene_symbol:APP
Gene_synonyms:alpha-sAPP
Gene_source:HGNC:620



Transcript annotation


Transcript_name:ENST00000357903.7
Distance:9
Num_trans:351
All_trans:HGNC:620



TATA-Box annotation


Distance to TSS:79
Nearest PromoterID:NM_020182
Entrez ID:56937
Nearest Unigene:Hs.517155
Nearest Refseq:NM_020182
Nearest Ensembl:ENSG00000124225
Gene Name:amyloid beta precursor protein
Gene Alias:STAG1|TMEPAI
Gene Description:prostate transmembrane protein, androgen induced 1
Gene Type:protein-coding
CpG%:0.135
GC%:0.721393
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):