Difference between revisions of "TSS:Hg 242698.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CYPH= | |CYPH= | ||
|HEL-S-69p= | |HEL-S-69p= | ||
| − | |all_trans= | + | |all_trans=HGNC:30377 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_021130 | |nearest_refseq=NM_021130 | ||
|nearest_unigene=Hs.356331 | |nearest_unigene=Hs.356331 | ||
| − | |num_trans= | + | |num_trans=23513 |
|species=human | |species=human | ||
|start=143815308 | |start=143815308 | ||
Latest revision as of 14:53, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 143815308 |
|---|---|
| End of the center position in the TSS region: | 143815309 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF240677 |
|---|---|
| Distance: | -63 |
| Num_trans: | 23513 |
| All_trans: | HGNC:30377 |
TATA-Box annotation
| Distance to TSS: | -32 |
|---|---|
| Nearest PromoterID: | NM_021130 |
| Entrez ID: | 5478 |
| Nearest Unigene: | Hs.356331 |
| Nearest Refseq: | NM_021130 |
| Nearest Ensembl: | ENSG00000196262 |
| Gene Name: | scribble planar cell polarity protein |
| Gene Alias: | CYPA|CYPH|HEL-S-69p |
| Gene Description: | peptidylprolyl isomerase A |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -2(TGGTATAAAAGG,-,0.00) |
