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Difference between revisions of "TSS:Hg 242723.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AY363099:-1 ENST00000381869.5:-41 ENST00000523718.5:-41 NM_001001925:-41 NM_001001924:-41 AK310871:-41 FJ458441:-131 ENST00000262102.10:208 BC136320:208 BC171765:208 NM_001363057:-218 NM_001363060:-218 NM_001363059:-348 NM_001363058:-348 NM_001363062:-348 NR_156437:-348 FJ458440:-353 LF213941:-362 MA449518:-362 LF208094:-363 MA443671:-363
+
|all_trans=HGNC:29789
 
|chr=chr8
 
|chr=chr8
 
|cpg_percent=0.13
 
|cpg_percent=0.13
Line 22: Line 22:
 
|nearest_refseq=NM_024963
 
|nearest_refseq=NM_024963
 
|nearest_unigene=Hs.623974
 
|nearest_unigene=Hs.623974
|num_trans=21
+
|num_trans=57509
 
|species=human
 
|species=human
 
|start=17800875
 
|start=17800875

Latest revision as of 14:53, 21 July 2021

Basic information about the TSS


TSS ID:hg_242723.1
Species:human
Chr:chr8
TSS Classification:yes
Start:17800875
End:17800876
Strand:-
TSS Score:1
Start of the center position in the TSS region:17800875
End of the center position in the TSS region:17800876



Gene and protein annotation


Transcript_name:AY363099
Distance:-1
GeneID:57509
HGNC/MGI_ID:HGNC:29789
UniProt_ID:
Gene_name:microtubule associated scaffold protein 1
Gene_symbol:MTUS1
Gene_synonyms:ATBP ATIP1 ATIP3 DKFZp586D1519 FLJ14295 ICIS KIAA1288 MP44 MTSG1
Gene_source:HGNC:29789



Transcript annotation


Transcript_name:AY363099
Distance:-1
Num_trans:57509
All_trans:HGNC:29789



TATA-Box annotation


Distance to TSS:115
Nearest PromoterID:NM_001321213
Entrez ID:80028
Nearest Unigene:Hs.623974
Nearest Refseq:NM_024963
Nearest Ensembl:ENSG00000155034
Gene Name:microtubule associated scaffold protein 1
Gene Alias:Fbl18
Gene Description:F-box and leucine rich repeat protein 18
Gene Type:protein-coding
CpG%:0.13
GC%:0.716418
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):