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Difference between revisions of "TSS:Hg 243105.1"

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Line 3: Line 3:
 
|NKX3.1=
 
|NKX3.1=
 
|NKX3A=
 
|NKX3A=
|all_trans=BC071915:-3 U12465:-4 ENST00000373570.8:5 ENST00000493018.5:-11 ENST00000487431.1:-12 BC000348:-21 AK291072:-31 ENST00000348462.6:-33 NM_007209:-33 BC010919:-33 D28448:-33 ENST00000629845.1:-37 ENST00000495728.1:-57 BC094828:364 CU674168:364 KJ893256:364 KJ898381:364 DQ891363:364 DQ894543:364 CR456877:364
+
|all_trans=HGNC:10344
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.04
 
|cpg_percent=0.04
Line 25: Line 25:
 
|nearest_refseq=NM_006167
 
|nearest_refseq=NM_006167
 
|nearest_unigene=Hs.55999
 
|nearest_unigene=Hs.55999
|num_trans=20
+
|num_trans=11224
 
|species=human
 
|species=human
 
|start=124861919
 
|start=124861919

Latest revision as of 15:02, 21 July 2021

Basic information about the TSS


TSS ID:hg_243105.1
Species:human
Chr:chr9
TSS Classification:yes
Start:124861919
End:124861924
Strand:-
TSS Score:1
Start of the center position in the TSS region:124861921
End of the center position in the TSS region:124861922



Gene and protein annotation


Transcript_name:BC071915
Distance:-3
GeneID:11224
HGNC/MGI_ID:HGNC:10344
UniProt_ID:
Gene_name:ribosomal protein L35
Gene_symbol:RPL35
Gene_synonyms:L35
Gene_source:HGNC:10344



Transcript annotation


Transcript_name:BC071915
Distance:-3
Num_trans:11224
All_trans:HGNC:10344



TATA-Box annotation


Distance to TSS:47279
Nearest PromoterID:NM_001256339
Entrez ID:4824
Nearest Unigene:Hs.55999
Nearest Refseq:NM_006167
Nearest Ensembl:ENSG00000167034
Gene Name:ribosomal protein L35
Gene Alias:BAPX2|NKX3|NKX3.1|NKX3A
Gene Description:NK3 homeobox 1
Gene Type:protein-coding
CpG%:0.04
GC%:0.517413
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):