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Difference between revisions of "TSS:Hg 46501.1"

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Line 3: Line 3:
 
|PDEB=
 
|PDEB=
 
|RP40=
 
|RP40=
|all_trans=S41458:0 EU176360:4 DQ895767:4 X66142:4 CU674100:8 KJ897313:8 KR709770:8 KR709771:8 BT009794:9 ENST00000255622.10:-14 BC000249:-14 ENST00000496514.6:-25 NM_000283:-25 NM_001145291:-25
+
|all_trans=HGNC:8786
 
|chr=chr4
 
|chr=chr4
 
|cpg_percent=0.035
 
|cpg_percent=0.035
Line 25: Line 25:
 
|nearest_refseq=NM_000283
 
|nearest_refseq=NM_000283
 
|nearest_unigene=Hs.623810
 
|nearest_unigene=Hs.623810
|num_trans=14
+
|num_trans=5158
 
|rd1=
 
|rd1=
 
|species=human
 
|species=human

Latest revision as of 23:23, 21 July 2021

Basic information about the TSS


TSS ID:hg_46501.1
Species:human
Chr:chr4
TSS Classification:yes
Start:625597
End:625618
Strand:+
TSS Score:1
Start of the center position in the TSS region:625607
End of the center position in the TSS region:625608



Gene and protein annotation


Transcript_name:S41458
Distance:0
GeneID:5158
HGNC/MGI_ID:HGNC:8786
UniProt_ID:
Gene_name:phosphodiesterase 6B
Gene_symbol:PDE6B
Gene_synonyms:CSNB3 CSNBAD2 RP40 rd1
Gene_source:HGNC:8786



Transcript annotation


Transcript_name:S41458
Distance:0
Num_trans:5158
All_trans:HGNC:8786



TATA-Box annotation


Distance to TSS:34
Nearest PromoterID:NM_001145291
Entrez ID:5158
Nearest Unigene:Hs.623810
Nearest Refseq:NM_000283
Nearest Ensembl:ENSG00000133256
Gene Name:phosphodiesterase 6B
Gene Alias:CSNB3|CSNBAD2|GMP-PDEbeta|PDEB|RP40|rd1
Gene Description:phosphodiesterase 6B
Gene Type:protein-coding
CpG%:0.035
GC%:0.587065
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):