Difference between revisions of "TSS:Hg 49568.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:11269 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_005841 | |nearest_refseq=NM_005841 | ||
|nearest_unigene=Hs.744854 | |nearest_unigene=Hs.744854 | ||
| − | |num_trans= | + | |num_trans=10252 |
|species=human | |species=human | ||
|start=123399527 | |start=123399527 | ||
| Line 28: | Line 28: | ||
|strand=+ | |strand=+ | ||
|tata_box=80(TTCCTTTAAAGC,-,0.00),81(TCCTTTAAAGCA,+,0.00) | |tata_box=80(TTCCTTTAAAGC,-,0.00),81(TCCTTTAAAGCA,+,0.00) | ||
| − | |transcript_name= | + | |transcript_name=BC063856 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_49568.1 | |tss_id=hg_49568.1 | ||
Latest revision as of 00:29, 22 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 123399537 |
|---|---|
| End of the center position in the TSS region: | 123399538 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC063856 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10252 |
| All_trans: | HGNC:11269 |
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NM_005841 |
| Entrez ID: | 10252 |
| Nearest Unigene: | Hs.744854 |
| Nearest Refseq: | NM_005841 |
| Nearest Ensembl: | ENSG00000164056 |
| Gene Name: | sprouty RTK signaling antagonist 1 |
| Gene Alias: | hSPRY1 |
| Gene Description: | sprouty RTK signaling antagonist 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 80(TTCCTTTAAAGC,-,0.00),81(TCCTTTAAAGCA,+,0.00) |
