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Difference between revisions of "TSS:Hg 52008.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=NM_001377151:0 AK289662:0 ENST00000510233.5:311 ENST00000507069.5:311 ENST00000513005.5:311 ENST00000509716.2:311 AB384913:318 JF432507:318 KJ901438:318 KU178081:318 KU178082:318 KU178083:318 KU178084:318 KU178085:318 ENST00000503806.5:-321 ENST00000356504.5:-337 AK125179:-337 ENST00000514090.5:-339 ENST00000506961.5:-340 NM_001114175:-367 NM_001330690:-367 NM_001377147:-367 NM_001377153:-367 NM_001377150:-367 NM_001377149:-367 NM_001377148:-367
+
|all_trans=HGNC:4076
 
|chr=chr4
 
|chr=chr4
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 22: Line 22:
 
|nearest_refseq=NM_000807
 
|nearest_refseq=NM_000807
 
|nearest_unigene=Hs.48372
 
|nearest_unigene=Hs.48372
|num_trans=26
+
|num_trans=2555
 
|species=human
 
|species=human
 
|start=46389023
 
|start=46389023
 
|start_of_center_position=46389032
 
|start_of_center_position=46389032
 
|strand=-
 
|strand=-
|transcript_name=NM_001377151 AK289662
+
|transcript_name=AK289662
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_52008.1
 
|tss_id=hg_52008.1

Latest revision as of 01:22, 22 July 2021

Basic information about the TSS


TSS ID:hg_52008.1
Species:human
Chr:chr4
TSS Classification:yes
Start:46389023
End:46389042
Strand:-
TSS Score:1
Start of the center position in the TSS region:46389032
End of the center position in the TSS region:46389033



Gene and protein annotation


Transcript_name:AK289662
Distance:0
GeneID:2555
HGNC/MGI_ID:HGNC:4076
UniProt_ID:
Gene_name:gamma-aminobutyric acid type A receptor subunit alpha2
Gene_symbol:GABRA2
Gene_synonyms:
Gene_source:HGNC:4076



Transcript annotation


Transcript_name:AK289662
Distance:0
Num_trans:2555
All_trans:HGNC:4076



TATA-Box annotation


Distance to TSS:346
Nearest PromoterID:NM_001114175
Entrez ID:2555
Nearest Unigene:Hs.48372
Nearest Refseq:NM_000807
Nearest Ensembl:ENSG00000151834
Gene Name:gamma-aminobutyric acid type A receptor subunit alpha2
Gene Alias:-
Gene Description:gamma-aminobutyric acid type A receptor alpha2 subunit
Gene Type:protein-coding
CpG%:0.02
GC%:0.477612
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):