Difference between revisions of "TSS:Hg 52013.1"
From referenceTSS
| Line 28: | Line 28: | ||
|strand=- | |strand=- | ||
|tata_box=-28(TCTTTTATAGTC,+,0.00) | |tata_box=-28(TCTTTTATAGTC,+,0.00) | ||
| − | |transcript_name=NM_001114175 NM_001330690 NM_001377147 | + | |transcript_name=NM_001114175.3 NM_001377149.1 NM_001377153.1 NM_001377148.1 NM_001330690.2 NM_001377147.1 NM_001377150.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_52013.1 | |tss_id=hg_52013.1 | ||
Latest revision as of 01:22, 22 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 46389467 |
|---|---|
| End of the center position in the TSS region: | 46389468 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001114175.3 NM_001377149.1 NM_001377153.1 NM_001377148.1 NM_001330690.2 NM_001377147.1 NM_001377150.1 |
|---|---|
| Distance: | 48 |
| Num_trans: | 21 |
| All_trans: | NM_001114175:48 NM_001330690:48 NM_001377147:48 NM_001377153:48 NM_001377150:48 NM_001377149:48 NM_001377148:48 ENST00000507460.1:-71 AK307128:-71 ENST00000506961.5:75 ENST00000514090.5:76 ENST00000356504.5:78 AK125179:78 ENST00000503806.5:94 AB209295:-276 ENST00000630416.2:-309 ENST00000514193.5:-309 AK293466:-309 AK289662:420 NM_001377151:422 S62907:-449 |
TATA-Box annotation
| Distance to TSS: | 82 |
|---|---|
| Nearest PromoterID: | NM_001330690 |
| Entrez ID: | 2555 |
| Nearest Unigene: | Hs.48372 |
| Nearest Refseq: | NM_000807 |
| Nearest Ensembl: | ENSG00000151834 |
| Gene Name: | gamma-aminobutyric acid type A receptor subunit alpha2 |
| Gene Alias: | - |
| Gene Description: | gamma-aminobutyric acid type A receptor alpha2 subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -28(TCTTTTATAGTC,+,0.00) |
