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Difference between revisions of "TSS:Hg 52018.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000540012.5:20 ENST00000381620.9:-55 NM_000807:-55 NM_001377152:-55 NM_001377144:-55 NM_001286827:-55 S62907:131 NM_001377154:-227 NM_001377146:-227 NM_001377145:-227 NM_001377155:-227 ENST00000630416.2:271 ENST00000514193.5:271 AK293466:271 AB209295:304 ENST00000515082.5:-331 BC022488:-331
+
|all_trans=HGNC:4076
 
|chr=chr4
 
|chr=chr4
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 22: Line 22:
 
|nearest_refseq=NM_000807
 
|nearest_refseq=NM_000807
 
|nearest_unigene=Hs.48372
 
|nearest_unigene=Hs.48372
|num_trans=17
+
|num_trans=2555
 
|species=human
 
|species=human
 
|start=46390058
 
|start=46390058

Latest revision as of 01:22, 22 July 2021

Basic information about the TSS


TSS ID:hg_52018.1
Species:human
Chr:chr4
TSS Classification:yes
Start:46390058
End:46390073
Strand:-
TSS Score:1
Start of the center position in the TSS region:46390065
End of the center position in the TSS region:46390066



Gene and protein annotation


Transcript_name:ENST00000540012.5
Distance:20
GeneID:2555
HGNC/MGI_ID:HGNC:4076
UniProt_ID:A0A0A0MTM5
Gene_name:gamma-aminobutyric acid type A receptor subunit alpha2
Gene_symbol:GABRA2
Gene_synonyms:
Gene_source:HGNC:4076



Transcript annotation


Transcript_name:ENST00000540012.5
Distance:20
Num_trans:2555
All_trans:HGNC:4076



TATA-Box annotation


Distance to TSS:62
Nearest PromoterID:NM_001286827
Entrez ID:2555
Nearest Unigene:Hs.48372
Nearest Refseq:NM_000807
Nearest Ensembl:ENSG00000151834
Gene Name:gamma-aminobutyric acid type A receptor subunit alpha2
Gene Alias:-
Gene Description:gamma-aminobutyric acid type A receptor alpha2 subunit
Gene Type:protein-coding
CpG%:0.1
GC%:0.716418
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):