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Difference between revisions of "TSS:Hg 53375.1"

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Line 4: Line 4:
 
|PP3105=
 
|PP3105=
 
|ZIP8=
 
|ZIP8=
|all_trans=ENST00000394833.6:-190 AB040120:-190 NM_022154:-242 ENST00000424970.6:-256 AK304274:-256 DQ892212:283 KJ894532:283 DQ895407:283 CU680230:283 NM_001135147:-304 ENST00000514000.5:-488 AF193052:-500
+
|all_trans=HGNC:20862
 
|chr=chr4
 
|chr=chr4
 
|cpg_percent=0.07
 
|cpg_percent=0.07
Line 26: Line 26:
 
|nearest_refseq=NM_022154
 
|nearest_refseq=NM_022154
 
|nearest_unigene=Hs.288034
 
|nearest_unigene=Hs.288034
|num_trans=12
+
|num_trans=64116
 
|species=human
 
|species=human
 
|start=102344944
 
|start=102344944

Latest revision as of 01:52, 22 July 2021

Basic information about the TSS


TSS ID:hg_53375.1
Species:human
Chr:chr4
TSS Classification:no
Start:102344944
End:102344949
Strand:-
TSS Score:1
Start of the center position in the TSS region:102344946
End of the center position in the TSS region:102344947



Gene and protein annotation


Transcript_name:ENST00000394833.6 AB040120
Distance:-190
GeneID:64116
HGNC/MGI_ID:HGNC:20862
UniProt_ID:A0A024RDG0
Gene_name:solute carrier family 39 member 8
Gene_symbol:SLC39A8
Gene_synonyms:BIGM103
Gene_source:HGNC:20862



Transcript annotation


Transcript_name:ENST00000394833.6 AB040120
Distance:-190
Num_trans:64116
All_trans:HGNC:20862



TATA-Box annotation


Distance to TSS:244
Nearest PromoterID:NM_022154
Entrez ID:64116
Nearest Unigene:Hs.288034
Nearest Refseq:NM_022154
Nearest Ensembl:ENSG00000138821
Gene Name:solute carrier family 39 member 8
Gene Alias:BIGM103|CDG2N|LZT-Hs6|PP3105|ZIP8
Gene Description:solute carrier family 39 member 8
Gene Type:protein-coding
CpG%:0.07
GC%:0.676617
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):