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Difference between revisions of "TSS:Hg 57643.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK290034:-89 AB020685:-114 BC041337:-123 ENST00000379982.8:-126 NM_014899:-126 BC013169:-140 ENST00000512878.1:261 BC020231:-285 ENST00000506817.1:-316 BC047884:-316 CU691986:390 KJ898412:390 AB385392:395 ENST00000510623.1:492
+
|all_trans=HGNC:18757
 
|chr=chr5
 
|chr=chr5
 
|cpg_percent=0.145
 
|cpg_percent=0.145
Line 22: Line 22:
 
|nearest_refseq=NM_014899
 
|nearest_refseq=NM_014899
 
|nearest_unigene=Hs.445030
 
|nearest_unigene=Hs.445030
|num_trans=14
+
|num_trans=22836
 
|species=human
 
|species=human
 
|start=95731461
 
|start=95731461

Latest revision as of 03:24, 22 July 2021

Basic information about the TSS


TSS ID:hg_57643.1
Species:human
Chr:chr5
TSS Classification:yes
Start:95731461
End:95731464
Strand:+
TSS Score:1
Start of the center position in the TSS region:95731462
End of the center position in the TSS region:95731463



Gene and protein annotation


Transcript_name:AK290034
Distance:-89
GeneID:22836
HGNC/MGI_ID:HGNC:18757
UniProt_ID:
Gene_name:Rho related BTB domain containing 3
Gene_symbol:RHOBTB3
Gene_synonyms:KIAA0878
Gene_source:HGNC:18757



Transcript annotation


Transcript_name:AK290034
Distance:-89
Num_trans:22836
All_trans:HGNC:18757



TATA-Box annotation


Distance to TSS:127
Nearest PromoterID:NM_014899
Entrez ID:22836
Nearest Unigene:Hs.445030
Nearest Refseq:NM_014899
Nearest Ensembl:ENSG00000164292
Gene Name:Rho related BTB domain containing 3
Gene Alias:-
Gene Description:Rho related BTB domain containing 3
Gene Type:protein-coding
CpG%:0.145
GC%:0.78607
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):