Personal tools

Difference between revisions of "TSS:Hg 5783.1"

From referenceTSS

Jump to: navigation, search
 
Line 4: Line 4:
 
|TRKA=
 
|TRKA=
 
|Trk-A=
 
|Trk-A=
|all_trans=ENST00000489021.6:0 ENST00000392302.7:12 ENST00000674537.1:27 ENST00000497019.7:35 AK126428:35 NM_001007792:106
+
|all_trans=HGNC:8031
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 26: Line 26:
 
|nearest_refseq=NM_002529
 
|nearest_refseq=NM_002529
 
|nearest_unigene=Hs.406293
 
|nearest_unigene=Hs.406293
|num_trans=6
+
|num_trans=4914
 
|p140-TrkA=
 
|p140-TrkA=
 
|species=human
 
|species=human

Latest revision as of 03:28, 22 July 2021

Basic information about the TSS


TSS ID:hg_5783.1
Species:human
Chr:chr1
TSS Classification:yes
Start:156815633
End:156815644
Strand:+
TSS Score:1
Start of the center position in the TSS region:156815638
End of the center position in the TSS region:156815639



Gene and protein annotation


Transcript_name:ENST00000489021.6
Distance:0
GeneID:4914
HGNC/MGI_ID:HGNC:8031
UniProt_ID:
Gene_name:neurotrophic receptor tyrosine kinase 1
Gene_symbol:NTRK1
Gene_synonyms:MTC TRK TRKA
Gene_source:HGNC:8031



Transcript annotation


Transcript_name:ENST00000489021.6
Distance:0
Num_trans:4914
All_trans:HGNC:8031



TATA-Box annotation


Distance to TSS:-111
Nearest PromoterID:NM_001007792
Entrez ID:4914
Nearest Unigene:Hs.406293
Nearest Refseq:NM_002529
Nearest Ensembl:ENSG00000198400
Gene Name:neurotrophic receptor tyrosine kinase 1
Gene Alias:MTC|TRK|TRK1|TRKA|Trk-A|p140-TrkA
Gene Description:neurotrophic receptor tyrosine kinase 1
Gene Type:protein-coding
CpG%:0.01
GC%:0.512438
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):