Personal tools

Difference between revisions of "TSS:Hg 5786.1"

From referenceTSS

Jump to: navigation, search
 
Line 4: Line 4:
 
|TRKA=
 
|TRKA=
 
|Trk-A=
 
|Trk-A=
|all_trans=ENST00000524377.7:0 NM_001012331:5 NM_002529:5 ENST00000358660.3:20 AK312704:20 AK290759:20 BC144239:-24 BC136554:-24 ENST00000533630.1:39 ENST00000368196.7:-44 M23102:-44 ENST00000675461.1:61 KJ534902:61 KJ534903:61 BC062580:62
+
|all_trans=HGNC:8031
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.12
 
|cpg_percent=0.12
Line 26: Line 26:
 
|nearest_refseq=NM_002529
 
|nearest_refseq=NM_002529
 
|nearest_unigene=Hs.406293
 
|nearest_unigene=Hs.406293
|num_trans=15
+
|num_trans=4914
 
|p140-TrkA=
 
|p140-TrkA=
 
|species=human
 
|species=human

Latest revision as of 03:29, 22 July 2021

Basic information about the TSS


TSS ID:hg_5786.1
Species:human
Chr:chr1
TSS Classification:yes
Start:156860858
End:156860874
Strand:+
TSS Score:1
Start of the center position in the TSS region:156860866
End of the center position in the TSS region:156860867



Gene and protein annotation


Transcript_name:ENST00000524377.7
Distance:0
GeneID:4914
HGNC/MGI_ID:HGNC:8031
UniProt_ID:P04629
Gene_name:neurotrophic receptor tyrosine kinase 1
Gene_symbol:NTRK1
Gene_synonyms:MTC TRK TRKA
Gene_source:HGNC:8031



Transcript annotation


Transcript_name:ENST00000524377.7
Distance:0
Num_trans:4914
All_trans:HGNC:8031



TATA-Box annotation


Distance to TSS:-13
Nearest PromoterID:NM_002529
Entrez ID:4914
Nearest Unigene:Hs.406293
Nearest Refseq:NM_002529
Nearest Ensembl:ENSG00000198400
Gene Name:neurotrophic receptor tyrosine kinase 1
Gene Alias:MTC|TRK|TRK1|TRKA|Trk-A|p140-TrkA
Gene Description:neurotrophic receptor tyrosine kinase 1
Gene Type:protein-coding
CpG%:0.12
GC%:0.761194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):