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Difference between revisions of "TSS:Hg 6218.1"

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{{TSSDetail
 
{{TSSDetail
−
|all_trans=ENST00000677837.1:0 ENST00000679169.1:0 ENST00000678880.1:0 ENST00000677745.1:0 ENST00000677358.1:0 ENST00000677089.1:0 ENST00000480762.6:0 ENST00000678532.1:0 ENST00000677643.1:0 ENST00000678648.1:0 ENST00000677336.1:0 ENST00000677471.1:0 ENST00000677948.1:0 ENST00000678068.1:0 ENST00000676972.1:0 ENST00000475570.1:0 ENST00000678559.1:0 ENST00000676795.1:0 ENST00000478866.5:0 ENST00000677103.1:0 NM_001166159:0 NM_001377299:0 NM_001377302:0 NR_165188:0 AK301641:0 AK315977:0 AK314807:0 BC000170:0 AF013160:1 AF050640:1 AK222618:2 AK309871:4 ENST00000679218.1:-5 BC001456:6 DQ894087:7 Z36812:13 ENST00000679142.1:30 ENST00000678982.1:-40 ENST00000677063.1:-40 ENST00000677045.1:-40 ENST00000677736.1:-67 ENST00000678328.1:-67 ENST00000676583.1:-67 ENST00000493849.6:-67 ENST00000677657.1:-67 ENST00000676726.1:-67 ENST00000677916.1:-67 ENST00000677495.1:-67 ENST00000678484.1:-67 ENST00000679239.1:-67 ENST00000677050.1:-67 ENST00000678850.1:-67 ENST00000677653.1:-67 ENST00000678783.1:-67 ENST00000676871.1:-67 ENST00000677577.1:-67 ENST00000677453.1:-84 ENST00000676770.1:97 ENST00000677033.1:155 ENST00000678511.1:-162 ENST00000392179.5:-207 ENST00000467295.6:-496
+
|all_trans=HGNC:7708
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.095
 
|cpg_percent=0.095
Line 22: Line 22:
 
|nearest_refseq=NM_004550
 
|nearest_refseq=NM_004550
 
|nearest_unigene=Hs.173611
 
|nearest_unigene=Hs.173611
−
|num_trans=62
+
|num_trans=4720
 
|species=human
 
|species=human
 
|start=161202353
 
|start=161202353
 
|start_of_center_position=161202366
 
|start_of_center_position=161202366
 
|strand=+
 
|strand=+
−
|transcript_name=ENST00000677837.1 ENST00000679169.1 ENST00000678880.1 ENST00000677745.1 ENST00000677358.1 ENST00000677089.1 ENST00000480762.6 ENST00000678532.1 ENST00000677643.1 ENST00000678648.1 ENST00000677336.1 ENST00000677471.1 ENST00000677948.1 ENST00000678068.1 ENST00000676972.1 ENST00000475570.1 ENST00000678559.1 ENST00000676795.1 ENST00000478866.5 ENST00000677103.1 NM_001166159 NM_001377299 NM_001377302 NR_165188 AK301641 AK315977 AK314807 BC000170
+
|transcript_name=ENST00000677837.1 ENST00000679169.1 ENST00000678880.1 ENST00000677745.1 ENST00000677358.1 ENST00000677089.1 ENST00000480762.6 ENST00000678532.1 ENST00000677643.1 ENST00000678648.1 ENST00000677336.1 ENST00000677471.1 ENST00000677948.1 ENST00000678068.1 ENST00000676972.1 ENST00000475570.1 ENST00000678559.1 ENST00000676795.1 ENST00000478866.5 ENST00000677103.1 AK301641 AK315977 AK314807 BC000170
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_6218.1
 
|tss_id=hg_6218.1

Latest revision as of 05:03, 22 July 2021

Basic information about the TSS

TSS ID:hg_6218.1
Species:human
Chr:chr1
TSS Classification:yes
Start:161202353
End:161202379
Strand:+
TSS Score:1
Start of the center position in the TSS region:161202366
End of the center position in the TSS region:161202367



Gene and protein annotation

Transcript_name:ENST00000677837.1 ENST00000679169.1 ENST00000678880.1 ENST00000677745.1 ENST00000677358.1 ENST00000677089.1 ENST00000480762.6 ENST00000678532.1 ENST00000677643.1 ENST00000678648.1 ENST00000677336.1 ENST00000677471.1 ENST00000677948.1 ENST00000678068.1 ENST00000676972.1 ENST00000475570.1 ENST00000678559.1 ENST00000676795.1 ENST00000478866.5 ENST00000677103.1 AK301641 AK315977 AK314807 BC000170
Distance:0
GeneID:4720
HGNC/MGI_ID:HGNC:7708
UniProt_ID:B7Z792 B7Z9L2 O75306
Gene_name:NADH:ubiquinone oxidoreductase core subunit S2
Gene_symbol:NDUFS2
Gene_synonyms:CI-49
Gene_source:HGNC:7708



Transcript annotation

Transcript_name:ENST00000677837.1 ENST00000679169.1 ENST00000678880.1 ENST00000677745.1 ENST00000677358.1 ENST00000677089.1 ENST00000480762.6 ENST00000678532.1 ENST00000677643.1 ENST00000678648.1 ENST00000677336.1 ENST00000677471.1 ENST00000677948.1 ENST00000678068.1 ENST00000676972.1 ENST00000475570.1 ENST00000678559.1 ENST00000676795.1 ENST00000478866.5 ENST00000677103.1 AK301641 AK315977 AK314807 BC000170
Distance:0
Num_trans:4720
All_trans:HGNC:7708



TATA-Box annotation

Distance to TSS:219
Nearest PromoterID:NM_001166159
Entrez ID:4720
Nearest Unigene:Hs.173611
Nearest Refseq:NM_004550
Nearest Ensembl:ENSG00000158864
Gene Name:NADH:ubiquinone oxidoreductase core subunit S2
Gene Alias:CI-49|MC1DN6
Gene Description:NADH:ubiquinone oxidoreductase core subunit S2
Gene Type:protein-coding
CpG%:0.095
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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