Difference between revisions of "TSS:Hg 6354.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:8632 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_002585 | |nearest_refseq=NM_002585 | ||
|nearest_unigene=Hs.557097 | |nearest_unigene=Hs.557097 | ||
| − | |num_trans= | + | |num_trans=5087 |
|species=human | |species=human | ||
|start=164559103 | |start=164559103 | ||
|start_of_center_position=164559122 | |start_of_center_position=164559122 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000420696.7 | + | |transcript_name=ENST00000420696.7 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_6354.1 | |tss_id=hg_6354.1 | ||
Latest revision as of 05:33, 22 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 164559122 |
|---|---|
| End of the center position in the TSS region: | 164559123 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000420696.7 |
|---|---|
| Distance: | 42 |
| Num_trans: | 5087 |
| All_trans: | HGNC:8632 |
TATA-Box annotation
| Distance to TSS: | -237 |
|---|---|
| Nearest PromoterID: | NM_001353131 |
| Entrez ID: | 5087 |
| Nearest Unigene: | Hs.557097 |
| Nearest Refseq: | NM_002585 |
| Nearest Ensembl: | ENSG00000185630 |
| Gene Name: | PBX homeobox 1 |
| Gene Alias: | CAKUHED |
| Gene Description: | PBX homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
