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Difference between revisions of "TSS:Hg 6359.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000340699.7:0 NM_001204961:-20 NM_001204963:-20 NM_001353131:-20 ENST00000485769.5:-180 ENST00000420696.7:-196 NM_002585:-196 AK291415:255 M86546:277 NM_001353130:299 ENST00000627490.2:321 AK299673:321 BC101578:348 BC143435:348 BC143451:348 ENST00000498497.2:400 ENST00000367897.5:400 ENST00000559240.5:400 BT006705:400 AB384885:400
+
|all_trans=HGNC:8632
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.03
 
|cpg_percent=0.03
Line 22: Line 22:
 
|nearest_refseq=NM_002585
 
|nearest_refseq=NM_002585
 
|nearest_unigene=Hs.557097
 
|nearest_unigene=Hs.557097
|num_trans=20
+
|num_trans=5087
 
|species=human
 
|species=human
 
|start=164559379
 
|start=164559379

Latest revision as of 05:34, 22 July 2021

Basic information about the TSS


TSS ID:hg_6359.1
Species:human
Chr:chr1
TSS Classification:yes
Start:164559379
End:164559423
Strand:+
TSS Score:1
Start of the center position in the TSS region:164559401
End of the center position in the TSS region:164559402



Gene and protein annotation


Transcript_name:ENST00000340699.7
Distance:0
GeneID:5087
HGNC/MGI_ID:HGNC:8632
UniProt_ID:F8WA05
Gene_name:PBX homeobox 1
Gene_symbol:PBX1
Gene_synonyms:
Gene_source:HGNC:8632



Transcript annotation


Transcript_name:ENST00000340699.7
Distance:0
Num_trans:5087
All_trans:HGNC:8632



TATA-Box annotation


Distance to TSS:41
Nearest PromoterID:NM_001204963
Entrez ID:5087
Nearest Unigene:Hs.557097
Nearest Refseq:NM_002585
Nearest Ensembl:ENSG00000185630
Gene Name:PBX homeobox 1
Gene Alias:CAKUHED
Gene Description:PBX homeobox 1
Gene Type:protein-coding
CpG%:0.03
GC%:0.562189
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):