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Difference between revisions of "TSS:Hg 6362.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK291415:38 M86546:60 NM_001353130:82 ENST00000627490.2:104 AK299673:104 BC101578:131 BC143435:131 BC143451:131 ENST00000498497.2:183 ENST00000367897.5:183 ENST00000559240.5:183 BT006705:183 AB384885:183 ENST00000340699.7:-223 NM_001204961:-270 NM_001204963:-270 NM_001353131:-270 ENST00000605467.1:373 ENST00000485769.5:-430 ENST00000420696.7:-446 NM_002585:-446
+
|all_trans=HGNC:8632
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 22: Line 22:
 
|nearest_refseq=NM_002585
 
|nearest_refseq=NM_002585
 
|nearest_unigene=Hs.557097
 
|nearest_unigene=Hs.557097
|num_trans=21
+
|num_trans=5087
 
|species=human
 
|species=human
 
|start=164559629
 
|start=164559629

Latest revision as of 05:34, 22 July 2021

Basic information about the TSS


TSS ID:hg_6362.1
Species:human
Chr:chr1
TSS Classification:yes
Start:164559629
End:164559640
Strand:+
TSS Score:1
Start of the center position in the TSS region:164559634
End of the center position in the TSS region:164559635



Gene and protein annotation


Transcript_name:AK291415
Distance:38
GeneID:5087
HGNC/MGI_ID:HGNC:8632
UniProt_ID:A8K5V0
Gene_name:PBX homeobox 1
Gene_symbol:PBX1
Gene_synonyms:
Gene_source:HGNC:8632



Transcript annotation


Transcript_name:AK291415
Distance:38
Num_trans:5087
All_trans:HGNC:8632



TATA-Box annotation


Distance to TSS:-87
Nearest PromoterID:NM_001353130
Entrez ID:5087
Nearest Unigene:Hs.557097
Nearest Refseq:NM_002585
Nearest Ensembl:ENSG00000185630
Gene Name:PBX homeobox 1
Gene Alias:CAKUHED
Gene Description:PBX homeobox 1
Gene Type:protein-coding
CpG%:0.01
GC%:0.497512
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):