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Difference between revisions of "TSS:Hg 6363.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK291415:0 M86546:0 NM_001353130:19 ENST00000627490.2:41 AK299673:41 BC101578:68 BC143435:68 BC143451:68 ENST00000498497.2:120 ENST00000367897.5:120 ENST00000559240.5:120 BT006705:120 AB384885:120 ENST00000340699.7:-268 ENST00000605467.1:310 NM_001204961:-315 NM_001204963:-315 NM_001353131:-315 ENST00000485769.5:-475 ENST00000420696.7:-491 NM_002585:-491
+
|all_trans=HGNC:8632
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 22: Line 22:
 
|nearest_refseq=NM_002585
 
|nearest_refseq=NM_002585
 
|nearest_unigene=Hs.557097
 
|nearest_unigene=Hs.557097
|num_trans=21
+
|num_trans=5087
 
|species=human
 
|species=human
 
|start=164559674
 
|start=164559674

Latest revision as of 05:35, 22 July 2021

Basic information about the TSS


TSS ID:hg_6363.1
Species:human
Chr:chr1
TSS Classification:yes
Start:164559674
End:164559703
Strand:+
TSS Score:1
Start of the center position in the TSS region:164559688
End of the center position in the TSS region:164559689



Gene and protein annotation


Transcript_name:AK291415 M86546
Distance:0
GeneID:5087
HGNC/MGI_ID:HGNC:8632
UniProt_ID:A8K5V0
Gene_name:PBX homeobox 1
Gene_symbol:PBX1
Gene_synonyms:
Gene_source:HGNC:8632



Transcript annotation


Transcript_name:AK291415 M86546
Distance:0
Num_trans:5087
All_trans:HGNC:8632



TATA-Box annotation


Distance to TSS:-33
Nearest PromoterID:NM_001353130
Entrez ID:5087
Nearest Unigene:Hs.557097
Nearest Refseq:NM_002585
Nearest Ensembl:ENSG00000185630
Gene Name:PBX homeobox 1
Gene Alias:CAKUHED
Gene Description:PBX homeobox 1
Gene Type:protein-coding
CpG%:0.02
GC%:0.522388
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):