Personal tools

Difference between revisions of "TSS:Hg 6365.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000627490.2:0 AK299673:0 BC101578:10 BC143435:10 BC143451:10 NM_001353130:-17 M86546:-39 AK291415:-61 ENST00000498497.2:62 ENST00000367897.5:62 ENST00000559240.5:62 BT006705:62 AB384885:62 ENST00000605467.1:252 ENST00000340699.7:-332 NM_001204961:-379 NM_001204963:-379 NM_001353131:-379
+
|all_trans=HGNC:8632
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.025
 
|cpg_percent=0.025
Line 22: Line 22:
 
|nearest_refseq=NM_002585
 
|nearest_refseq=NM_002585
 
|nearest_unigene=Hs.557097
 
|nearest_unigene=Hs.557097
|num_trans=18
+
|num_trans=5087
 
|species=human
 
|species=human
 
|start=164559738
 
|start=164559738

Latest revision as of 05:35, 22 July 2021

Basic information about the TSS


TSS ID:hg_6365.1
Species:human
Chr:chr1
TSS Classification:yes
Start:164559738
End:164559761
Strand:+
TSS Score:1
Start of the center position in the TSS region:164559749
End of the center position in the TSS region:164559750



Gene and protein annotation


Transcript_name:ENST00000627490.2 AK299673
Distance:0
GeneID:5087
HGNC/MGI_ID:HGNC:8632
UniProt_ID:P40424
Gene_name:PBX homeobox 1
Gene_symbol:PBX1
Gene_synonyms:
Gene_source:HGNC:8632



Transcript annotation


Transcript_name:ENST00000627490.2 AK299673
Distance:0
Num_trans:5087
All_trans:HGNC:8632



TATA-Box annotation


Distance to TSS:28
Nearest PromoterID:NM_001353130
Entrez ID:5087
Nearest Unigene:Hs.557097
Nearest Refseq:NM_002585
Nearest Ensembl:ENSG00000185630
Gene Name:PBX homeobox 1
Gene Alias:CAKUHED
Gene Description:PBX homeobox 1
Gene Type:protein-coding
CpG%:0.025
GC%:0.492537
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):