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Difference between revisions of "TSS:Hg 6366.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC101578:0 BC143435:0 BC143451:0 ENST00000627490.2:-24 AK299673:-24 ENST00000498497.2:45 ENST00000367897.5:45 ENST00000559240.5:45 BT006705:45 AB384885:45 NM_001353130:-46 M86546:-68 AK291415:-90 ENST00000605467.1:235 ENST00000340699.7:-361 NM_001204961:-408 NM_001204963:-408 NM_001353131:-408
+
|all_trans=HGNC:8632
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.03
 
|cpg_percent=0.03
Line 22: Line 22:
 
|nearest_refseq=NM_002585
 
|nearest_refseq=NM_002585
 
|nearest_unigene=Hs.557097
 
|nearest_unigene=Hs.557097
|num_trans=18
+
|num_trans=5087
 
|species=human
 
|species=human
 
|start=164559767
 
|start=164559767

Latest revision as of 05:35, 22 July 2021

Basic information about the TSS


TSS ID:hg_6366.1
Species:human
Chr:chr1
TSS Classification:yes
Start:164559767
End:164559778
Strand:+
TSS Score:1
Start of the center position in the TSS region:164559772
End of the center position in the TSS region:164559773



Gene and protein annotation


Transcript_name:BC101578 BC143435 BC143451
Distance:0
GeneID:5087
HGNC/MGI_ID:HGNC:8632
UniProt_ID:
Gene_name:PBX homeobox 1
Gene_symbol:PBX1
Gene_synonyms:
Gene_source:HGNC:8632



Transcript annotation


Transcript_name:BC101578 BC143435 BC143451
Distance:0
Num_trans:5087
All_trans:HGNC:8632



TATA-Box annotation


Distance to TSS:51
Nearest PromoterID:NM_001353130
Entrez ID:5087
Nearest Unigene:Hs.557097
Nearest Refseq:NM_002585
Nearest Ensembl:ENSG00000185630
Gene Name:PBX homeobox 1
Gene Alias:CAKUHED
Gene Description:PBX homeobox 1
Gene Type:protein-coding
CpG%:0.03
GC%:0.537313
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):