Difference between revisions of "TSS:Hg 78883.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|RAP1= | |RAP1= | ||
| − | |all_trans= | + | |all_trans=HGNC:17676 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_014504 | |nearest_refseq=NM_014504 | ||
|nearest_unigene=Hs.530053 | |nearest_unigene=Hs.530053 | ||
| − | |num_trans= | + | |num_trans=27342 |
|rabex-5= | |rabex-5= | ||
|species=human | |species=human | ||
| Line 29: | Line 29: | ||
|start_of_center_position=66682164 | |start_of_center_position=66682164 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000607882.5 | + | |transcript_name=ENST00000607882.5 AK056864 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_78883.1 | |tss_id=hg_78883.1 | ||
Latest revision as of 11:05, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 66682164 |
|---|---|
| End of the center position in the TSS region: | 66682165 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000607882.5 AK056864 |
|---|---|
| Distance: | 0 |
| Num_trans: | 27342 |
| All_trans: | HGNC:17676 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NM_001367732 |
| Entrez ID: | 27342 |
| Nearest Unigene: | Hs.530053 |
| Nearest Refseq: | NM_014504 |
| Nearest Ensembl: | ENSG00000154710 |
| Gene Name: | RAB guanine nucleotide exchange factor 1 |
| Gene Alias: | RABEX5|RAP1|rabex-5 |
| Gene Description: | RAB guanine nucleotide exchange factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
