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Difference between revisions of "TSS:Hg 78886.1"

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{{TSSDetail
 
{{TSSDetail
 
|RAP1=
 
|RAP1=
|all_trans=BC015330:0 ENST00000442563.5:22 ENST00000450873.6:22 ENST00000284957.9:22 NM_001367742:22 NM_001287062:22 NM_001367744:22 NM_001367736:22 NM_001367735:22 NM_001367756:22 NM_001367755:22 NM_001367754:22 NM_001367753:22 NM_001367751:22 NM_001367749:22 NM_001367750:22 NM_001367748:22 NM_001367747:22 NM_014504:22 NR_160287:22 NM_001367743:22 NM_001367739:22 NM_001367734:22 NM_001367724:22 AK223329:22 AK290678:22 AJ250042:22
+
|all_trans=HGNC:17676
 
|chr=chr7
 
|chr=chr7
 
|cpg_percent=0.155
 
|cpg_percent=0.155
Line 23: Line 23:
 
|nearest_refseq=NM_014504
 
|nearest_refseq=NM_014504
 
|nearest_unigene=Hs.530053
 
|nearest_unigene=Hs.530053
|num_trans=27
+
|num_trans=27342
 
|rabex-5=
 
|rabex-5=
 
|species=human
 
|species=human

Latest revision as of 11:05, 22 July 2021

Basic information about the TSS


TSS ID:hg_78886.1
Species:human
Chr:chr7
TSS Classification:yes
Start:66740684
End:66740711
Strand:+
TSS Score:1
Start of the center position in the TSS region:66740697
End of the center position in the TSS region:66740698



Gene and protein annotation


Transcript_name:BC015330
Distance:0
GeneID:27342
HGNC/MGI_ID:HGNC:17676
UniProt_ID:
Gene_name:RAB guanine nucleotide exchange factor 1
Gene_symbol:RABGEF1
Gene_synonyms:RABEX5 rabex-5
Gene_source:HGNC:17676



Transcript annotation


Transcript_name:BC015330
Distance:0
Num_trans:27342
All_trans:HGNC:17676



TATA-Box annotation


Distance to TSS:-35
Nearest PromoterID:NM_001367744
Entrez ID:27342
Nearest Unigene:Hs.530053
Nearest Refseq:NM_014504
Nearest Ensembl:ENSG00000154710
Gene Name:RAB guanine nucleotide exchange factor 1
Gene Alias:RABEX5|RAP1|rabex-5
Gene Description:RAB guanine nucleotide exchange factor 1
Gene Type:protein-coding
CpG%:0.155
GC%:0.731343
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):