Difference between revisions of "TSS:Hg 79085.1"
From referenceTSS
| Line 5: | Line 5: | ||
|WBSCR5= | |WBSCR5= | ||
|WSCR5= | |WSCR5= | ||
| − | |all_trans= | + | |all_trans=HGNC:12749 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_014146 | |nearest_refseq=NM_014146 | ||
|nearest_unigene=Hs.741249 | |nearest_unigene=Hs.741249 | ||
| − | |num_trans= | + | |num_trans=7462 |
|species=human | |species=human | ||
|start=74209997 | |start=74209997 | ||
|start_of_center_position=74210008 | |start_of_center_position=74210008 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000361082.7 ENST00000275635.11 ENST00000488266.5 ENST00000460943.6 | + | |transcript_name=ENST00000361082.7 ENST00000275635.11 ENST00000488266.5 ENST00000460943.6 AF161531 AF252611 AF252612 AF252614 AK225150 AK290916 AK290074 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_79085.1 | |tss_id=hg_79085.1 | ||
Latest revision as of 11:09, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 74210008 |
|---|---|
| End of the center position in the TSS region: | 74210009 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000361082.7 ENST00000275635.11 ENST00000488266.5 ENST00000460943.6 AF161531 AF252611 AF252612 AF252614 AK225150 AK290916 AK290074 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7462 |
| All_trans: | HGNC:12749 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_032464 |
| Entrez ID: | 7462 |
| Nearest Unigene: | Hs.741249 |
| Nearest Refseq: | NM_014146 |
| Nearest Ensembl: | ENSG00000086730 |
| Gene Name: | linker for activation of T cells family member 2 |
| Gene Alias: | HSPC046|LAB|NTAL|WBSCR15|WBSCR5|WSCR5 |
| Gene Description: | linker for activation of T cells family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
